What AI says about bollito

Bollito is a Snakemake pipeline for comprehensive single-cell RNA-seq analysis, covering QC, alignment, quantification, clustering, differential expression, trajectory inference, functional analysis, and RNA velocity. It integrates tools like Seurat, STARsolo, Vision, Slingshot, and Velocyto, and supports input from FASTQ files or expression matrices, with flexible configuration and automatic dependency management via Conda and containers.